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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911624.1_cds_XP_016461639.1_54940
CDS Infomation

[gene=LOC107784950] [db_xref=GeneID:107784950] [protein=CTP synthase-like] [partial=5'] [protein_id=XP_016461639.1] [location=complement(join(59579..59646,60256..60349,60574..60654,60749..60797,61283..61368,61468..61545,61635..61784,62763..62801,62881..62970,63277..63339,63417..63486,63765..63811,63894..63956,68810..68854,69293..69376,69476..69540,69690..69746,69877..69994,70088..70138,70239..>70421))] [gbkey=CDS]
Sequence

AAAATTGGTACTGTATTAACATACAATAGATTCTGGTCTTCCTCTGAAGCATCAAAGATT
ACTCTTATTCATTACAATAATAATGTGCTTCAACAGGTCGATCTGGATTTGGGAAATTAT
GAACGTTTTTTGGATGTGACATTGACAAGGGACAACAACATTACCACTGGAAAGATATAT
CAGTCTGTTCTGGAGAAGGAAAGGAAAGGTGATTATCTTGGAAAAACTGTTCAGGTGGTT
CCCCACATTACTGATGCTATTAAGGATTGGATTGAGTCGGTATCTCTGACCCCTGTGGAT
GGGAAAGATGGACCTGCAGATGTTTGTGTCATTGAATTGGGGGGGACTGTAGGTGATATT
GAATCGATGCCCTTCATTGAGGCTTTACGGCAATTGTATTTCTCAGTTGGGCAAGACAAC
TTTTGCCTTATTCATGTCAGTCTTATACCTGTACTAGGTGTTGTCGGTGAGCAAAAAACA
AAGCCTACGCAACATAGTGTGCGGGAGCTAAGAGCATTAGGTTTGACTCCCCATTTTTTG
GCATGCCGGTCTGCTCAGCCTTTACTGGAGAATACAAAACAGAAGCTTTCTCAGTTTTGT
CACGTTGCTAACATCCTAAATATCCATGATGTTCCAAACATTTGGCATATTCCGCTCCTG
CTTCGGAACCAAAATGCACATGATGCCGTTCTAAAGCAATTGGATTTGCTGAGTGTCGCA
AAACCTGTTGATTTACGGGAGTGGACGAGAAGAGCTGAGACCTTCGACAACCTTACCAAA
ACTGTTAGAATTGCGATGGTTGGGAAGTATGTTGGATTAACAGACTCTTACTTATCTGTA
GTGAAGGCCCTTTTGCATGCATGTATTGCATGTTCATATAAGCCATCCATTGACTGGATT
GCAGCATCAGATCTTGAAGATGATAGTGCTCAATCGGCCCCAGAAGCTTATGCAACAGCG
TGGGAGACTCTAAGGGGTGCAGCATGTGTCTTGGTTCCTGGTGGGTTTGGTGATCGTGGT
GTCAAGGGGATGATATTGGCTGCAAGGTATGCTAGGGAGAATAATGTACCGTATCTCGGG
ATTTGTTTAGGGATGCAGATTTCTGTAATTGAGTTTGCCAGATCTGCGTTGCATATGGAA
AAAGCAAACAGTGAAGAGTTTGATCCCCAGACACCGGAGCTTGTTGTAATATTTATGCCT
GAGGGGTCAAAAACACATATGGGAAGCACCATGAGGCTTGGATCTAGGAGAACGTTGTTC
CAGACTCCTGATTGTATCACGTCAAAACTGTATAGCAATTCTAAGTATGTGGATGAACGG
CATCGCCATAGATATGAGGTCAATCCTGAAGTTGTAGGGACTTTGGAAGAAGCTGGTCTG
AGATTTGTGGGAATGGACGAAAGTGGAAAACGAATGGAGATATTAGAGCTTCCAGGTCAC
CCATTTTATGTTGGTGTGCAATTTCATCCTGAATACAAGTCAAGGCCAGGGAGACCTTCA
GCTCCTTTTCTAGGGCTTATCATGGCAGCAACAGGACAGTTAGAAGCTTACGTCCAGATG
CAGCAGAATGGAAGCATATAA

Peptide Sequence

PEP ID

XP_016461639.1
PEP Infomation

PREDICTED: CTP synthase-like, partial [Nicotiana tabacum]
Sequence

KIGTVLTYNRFWSSSEASKITLIHYNNNVLQQVDLDLGNYERFLDVTLTRDNNITTGKIY
QSVLEKERKGDYLGKTVQVVPHITDAIKDWIESVSLTPVDGKDGPADVCVIELGGTVGDI
ESMPFIEALRQLYFSVGQDNFCLIHVSLIPVLGVVGEQKTKPTQHSVRELRALGLTPHFL
ACRSAQPLLENTKQKLSQFCHVANILNIHDVPNIWHIPLLLRNQNAHDAVLKQLDLLSVA
KPVDLREWTRRAETFDNLTKTVRIAMVGKYVGLTDSYLSVVKALLHACIACSYKPSIDWI
AASDLEDDSAQSAPEAYATAWETLRGAACVLVPGGFGDRGVKGMILAARYARENNVPYLG
ICLGMQISVIEFARSALHMEKANSEEFDPQTPELVVIFMPEGSKTHMGSTMRLGSRRTLF
QTPDCITSKLYSNSKYVDERHRHRYEVNPEVVGTLEEAGLRFVGMDESGKRMEILELPGH
PFYVGVQFHPEYKSRPGRPSAPFLGLIMAATGQLEAYVQMQQNGSI

Transcript Sequence

Gene sequence data has not been registered.